Part I: Overview
-
Chapter 1.
Bioinformatics: Mining the Massive Data from
High Throughput Genomics Experiments;
Haixu Tang, Sun Kim
(USA),
3 - 24.
-
Chapter 2.
An Introduction to Soft Computing;
Amit Konar, Swagatam Das
(India),
25 - 56.
Part II: Biological Sequence and Structure Analysis
-
Chapter 3.
Reconstructing Phylogenies with Memetic Algorithms
and Branch-and-Bound;
Jose E. Gallardo, Carlos Cotta, Antonio J. Fernandez
(Spain),
59 - 84.
-
Chapter 4.
Classification of RNA Sequences with Support Vector Machines;
Jason T. L. Wang, Xiaoming Wu
(USA),
85 - 108.
-
Chapter 5.
Beyond String Algorithms: Protein Sequence Analysis Using
Wavelet Transforms;
Arun Krishnan, Kuo-Bin Li
(Japan, Taiwan),
109 - 131.
-
Chapter 6.
Filtering Protein Surface Motifs Using Negative Instances of Active Sites
Candidates;
Nripendra L. Shrestha, Takenao Ohkawa
(Japan),
133 - 152.
-
Chapter 7.
Distill: A Machine Learning Approach to Ab Initio
Protein Structure Prediction;
Gianluca Pollastri, Davide Bau, Alessandro Vullo
(Ireland),
153 - 181.
-
Chapter 8.
In Silico Design of Ligands Using Properties of
Target Active Sites;
Sanghamitra Bandyopadhyay,
Santanu Santra,
Ujjwal Maulik,
Heinz Muehlenbein
(India, Germany),
183 - 201.
Part III: Gene Expression and Microarray Data Analysis
-
Chapter 9.
Inferring Regulations in a Genomic Network
from Gene Expression Profiles;
Nasimul Noman, Hitoshi Iba
(Japan),
205 - 229.
-
Chapter 10.
A Reliable Classification of Gene Clusters
for Cancer Samples Using a Hybrid
Multi-Objective Evolutionary Procedure;
Kalyanmoy Deb, A. Raji Reddy, Shamik Chaudhuri
(India),
231 - 257.
-
Chapter 11.
Feature Selection for Cancer Classification Using Ant Colony
Optimization and Support Vector Machines;
A. Gupta, V. K. Jayaraman, B. D. Kulkarni
(India),
259 - 280.
-
Chapter 12.
Sophisticated Methods for Cancer Classification Using Microarray Data;
Sung-Bae Cho, Han-Saem Park
(Korea),
281 - 302.
-
Chapter 13.
Multiobjective Evolutionary Approach to
Fuzzy Clustering of Microarray Data;
Anirban Mukhopadhyay,
Ujjwal Maulik,
Sanghamitra Bandyopadhyay
(India),
303 - 328.
Index, 329 - 332.
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