Model Code: Ca2+ Cooperativity of Exocytosis and Channel Domain Overlap
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The scripts following below reproduce the simulation results presented in the manuscript:

V. Matveev, R. Bertram, A. Sherman (2011)
Calcium Cooperativity of Exocytosis as a Measure of Calcium Channel Domain Overlap.
Brain Research 1398: 126-138. [ Full Text ]


 Fig2_Fig3_Rfig_noLog.m This CalC script generates the Figures 2 and 3 of the manuscript (define M=2 or M=5 in the beginning of the script)

 equiM5_vs_Dist.par This CalC script generates data used in Fig. 4A

 Fig4_M5equi_Dist.m This MATLAB script produces Fig. 4A based on data generated by CalC script equiM5_vs_Dist.par above

 equiM5_vs_Btot.par This CalC script generates data used in Fig. 4B

 Fig4_M5equi_Btot.m This MATLAB script produces Fig. 4B based on data generated by CalC script equiM5_vs_Btot.par above

 EquidistConfigGenerator.m Analyzes and stores data for all symmetries in a ring of M equidistant channels; this data is used by Fig4E.par

 Fig4E.par Calculate release rate for all configutations of M open channels organized in a ring.

 Fig4E.m Generates Fig. 4E based on simulation data produced by Fig4E.par



Supported in part by the National Science Foundation grant DMS 0817703 to Victor Matveev
Victor Matveev
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Last modified: January 8, 2010