Download and place all scripts in the same directory before executing.

M. Oh, S. Zhao, V. Matveev and F. Nadim (2012)
Neuromodulatory changes in short-term synaptic dynamics may be mediated by two distinct mechanisms of presynaptic calcium entry. Journal of Computational Neuroscience. Epub ahead of print.   PDF     Full Text  


♦ sweepGsynRandModel1.m Generate optimal parameter sets for Model 1, by fitting data contained in file data.txt
♦ sweepGsynRandModel2.m Generate optimal parameter sets for Model 2, by fitting data contained in file data.txt
_______________________________________________
♦ AnalyzeResultsModel1.m Generates Fig. 3 based on data in file DataRandGsynModel1.m produced by sweepGsynRandModel1.m
♦ AnalyzeResultsModel2.m Generates Fig. 6 based on data in file DataRandGsynModel2.m produced by sweepGsynRandModel2.m
♦ AnalyzeResultsGradient.m Generates Figs. 2 & 5 based on data in files DataRandGsynModel1.m and DataRandGsynModel2.m
_______________________________________________
♦ FitCostGsynModel1.m Calculate objective function for model 1
♦ FitCostGsynModel2.m Calculate objective function for model 2
♦ costBalancedInfo.m Lowest-level objective function fitting the time-course and short-term plasticity
_______________________________________________
♦ getData.m Utility data-processing routine
♦ extract.m Utility data-processing routine
♦ data.txt Experimental membrane potential time course
_______________________________________________
♦ DataRandGsynModel1.m Example output data: optimal parameter sets for Model 1 produced by sweepGsynRandModel1.m
♦ DataRandGsynModel2.m Example output data: optimal parameter sets for Model 2 produced by sweepGsynRandModel2.m



Supported in part by the National Science Foundation grant DMS 0817703 to Victor Matveev
Victor Matveev
This server is running a Redhat distribution of Linux.
Last modified: Aug 19, 2012