• Java based Probalign v1.3 beta with graphical user interface available here. Also contains standalone C++ source.
  • Screenshots . Some of the features in v1.3 are
    • Average column posterior probability displayed in numbers and column colors
    • View columns with high average posterior probability
    • Save to pdf
  • Mac OS executable package for Probalign beta 1.3 Java based graphical user interface version available here.
  • Mac OS executable package for Probalign beta 1.1 Java based graphical user interface version available here.
  • Probalign beta 1.1 Java based graphical user interface version available here.
  • Probalign beta 1.1 source code is available here.
  • Probalign beta 1.0 source code is available here. This is a standalone C++ version and is much faster than the previous pipeline of Perl and C++ programs.
  • The old Probalign code, implemented as a pipeline of C++ and Perl programs and slower than the current release, is available here.