Your Settings: Input RNA File: rna.struct Dissimilarity Threshold: 0.1 #========================= RNA =========================# >S.acidocaldarius P RNA 1 UAGGGGAGCCUAACAGGGGGUUACGGGAAUAUCCUGAGGAAACUCCAGCC 50 .(((((((((((((((((((...(((((...))))).............( 51 UCCAAGCCUCAUGGGAGCAGUUAGAUCUGCAGGGUUAGUGCUCUGGCUAC 100 (((........((((((((((....)))))(((((....)))))((...( 101 UGCACAGAAACGUAACCGGUAUAAUAGGAUAUGAAAAUGAGUUUAUAUGU 150 (((............(((((((((((...............((..((((( 151 AGUCUAGGUAACUAGGCUACAUAAAUGAGACCUAUUAUACCGGCUGAAAC 200 (((((((....)))))))))))))).......)))))))))))....... 201 GGCAGUCCUCCCAGGAGCAAGUAAGGAGGGGAUGAGUUGAGGUUCAACCC 250 .)))).)))))))))))...((.(((((((...(((........)))))) 251 UCCUAAGGACGCUUAGUAGAAUCCCCCUAAAUACAAAAGCUGGGUUAUUG 300 ))))....))............)))))).....................) 301 UUAGGCUCCCCUUAU 315 ))))))))))))... ######################## Repeat 1########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 C C G G U A U A A U A G G A U ( ( ( ( ( ( ( ( ( ( ( . . . . 142 175 A U G A A A A U G A G U A U G . . . . . . . . . . . ( ) . . A G A C C U A U U A U A C C G . . . . . ) ) ) ) ) ) ) ) ) ) 193 G ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 15 278 G G G A G C C U A A C A U A A ( ( ( ( ( ( ( ( ( ( ( ( ) . . A U A C A A A A G C U G G G U . . . . . . . . . . . . . . . 310 U A U U G U U A G G C U C C C . . . . ) ) ) ) ) ) ) ) ) ) ) ######################## Repeat 2########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 3 13 301 G G G G A G C C U A A U U A G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 311 G C U C C C C ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 12 302 A G G G G A G C C U A U A G G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 312 C U C C C C U ) ) ) ) ) ) ) ######################## Repeat 3########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 C G G U A U A A U A G G A U A ( ( ( ( ( ( ( ( ( ( . . . . . 142 175 U G A A A A U G A G U A U G A . . . . . . . . . . ( ) . . . 192 G A C C U A U U A U A C C G . . . . ) ) ) ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 15 278 G G A G C C U A A C A U A A A ( ( ( ( ( ( ( ( ( ( ( ) . . . U A C A A A A G C U G G G U U . . . . . . . . . . . . . . . 309 A U U G U U A G G C U C C . . . ) ) ) ) ) ) ) ) ) ) ######################## Repeat 4########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 156 163 U A U G U A G U C U A U A G G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 173 C U A C A U A ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 12 302 A G G G G A G C C U A U A G G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 312 C U C C C C U ) ) ) ) ) ) ) ######################## Repeat 5########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 156 163 U A U G U A G U C U A U A G G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 173 C U A C A U A ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 13 301 G G G G A G C C U A A U U A G ( ( ( ( ( ( ( ( ( ( ( ) ) ) ) 311 G C U C C C C ) ) ) ) ) ) ) ######################## Repeat 6########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 4 13 301 G G G A G C C U A A U U A G G ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 310 C U C C C ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 11 303 A G G G G A G C C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 312 C C C C U ) ) ) ) ) ######################## Repeat 7########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 4 13 301 G G G A G C C U A A U U A G G ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 310 C U C C C ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 12 302 G G G G A G C C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 311 U C C C C ) ) ) ) ) ######################## Repeat 8########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 125 184 C C G G U A U A A U A U U A U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 193 A C C G G ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 11 303 A G G G G A G C C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 312 C C C C U ) ) ) ) ) ######################## Repeat 9########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 125 184 C C G G U A U A A U A U U A U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 193 A C C G G ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 12 302 G G G G A G C C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 311 U C C C C ) ) ) ) ) ######################## Repeat 10########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 G G U A U A A U A G G A U A U ( ( ( ( ( ( ( ( ( . . . . . . 142 175 G A A A A U G A G U A U G A G . . . . . . . . . ( ) . . . . 191 A C C U A U U A U A C C . . . ) ) ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 15 278 G A G C C U A A C A U A A A U ( ( ( ( ( ( ( ( ( ( ) . . . . A C A A A A G C U G G G U U A . . . . . . . . . . . . . . . 308 U U G U U A G G C U C . . ) ) ) ) ) ) ) ) ) ######################## Repeat 11########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 155 164 U A U G U A G U C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 173 A C A U A ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 13 301 G G G A G C C U A A U U A G G ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 310 C U C C C ) ) ) ) ) ######################## Repeat 12########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 155 164 U A U G U A G U C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 173 A C A U A ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 125 184 C C G G U A U A A U A U U A U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 193 A C C G G ) ) ) ) ) ######################## Repeat 13########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 156 163 A U G U A G U C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 172 U A C A U ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 11 303 A G G G G A G C C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 312 C C C C U ) ) ) ) ) ######################## Repeat 14########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 156 163 A U G U A G U C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 172 U A C A U ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 12 302 G G G G A G C C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 311 U C C C C ) ) ) ) ) ######################## Repeat 15########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 156 163 A U G U A G U C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 172 U A C A U ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 13 301 G G G A G C C U A A U U A G G ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 310 C U C C C ) ) ) ) ) ######################## Repeat 16########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 156 163 A U G U A G U C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 172 U A C A U ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 125 184 C C G G U A U A A U A U U A U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 193 A C C G G ) ) ) ) ) ######################## Repeat 17########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 156 163 A U G U A G U C U A U A G G C ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 172 U A C A U ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 155 164 U A U G U A G U C U A G G C U ( ( ( ( ( ( ( ( ( ( ) ) ) ) ) 173 A C A U A ) ) ) ) ) ######################## Repeat 18########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 10 304 A G G G G A G C C G G C U C C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 312 C C U ) ) ) ######################## Repeat 19########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 11 303 G G G G A G C C U A G G C U C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 311 C C C ) ) ) ######################## Repeat 20########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 12 302 G G G A G C C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 310 C C C ) ) ) ######################## Repeat 21########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 100 C U G C A C A G A A A C G U A ( ( ( ( . . . . . . . . . . . 120 189 A C C G G U A C C G G C U G A . ( ( ( ( ( ) ) ) ) ) . . . . 205 A A C G G C A G . . . . ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 11 19 274 U A A C A G G G G C C C C U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) . A A U A C A A A A G C U G G G . . . . . . . . . . . . . . . 303 U U A U U G U U A . . . . . ) ) ) ) ######################## Repeat 22########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 124 185 C C G G U A U A A U U A U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 193 C G G ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) ######################## Repeat 23########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 10 304 A G G G G A G C C G G C U C C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 312 C C U ) ) ) ######################## Repeat 24########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 11 303 G G G G A G C C U A G G C U C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 311 C C C ) ) ) ######################## Repeat 25########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 12 302 G G G A G C C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 310 C C C ) ) ) ######################## Repeat 26########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 124 185 C C G G U A U A A U U A U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 193 C G G ) ) ) ######################## Repeat 27########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 G U A U A A U A G G A U A U G ( ( ( ( ( ( ( ( . . . . . . . 142 175 A A A A U G A G U A U G A G A . . . . . . . . ( ) . . . . . 190 C C U A U U A U A C . . ) ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 15 278 A G C C U A A C A U A A A U A ( ( ( ( ( ( ( ( ( ) . . . . . C A A A A G C U G G G U U A U . . . . . . . . . . . . . . . 307 U G U U A G G C U . ) ) ) ) ) ) ) ) ######################## Repeat 28########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 154 165 U A U G U A G U C G G C U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 173 A U A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) ######################## Repeat 29########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 154 165 U A U G U A G U C G G C U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 173 A U A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) ######################## Repeat 30########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 155 164 A U G U A G U C U A G G C U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 172 C A U ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) ######################## Repeat 31########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 155 164 A U G U A G U C U A G G C U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 172 C A U ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) ######################## Repeat 32########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 10 304 A G G G G A G C C G G C U C C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 312 C C U ) ) ) ######################## Repeat 33########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 11 303 G G G G A G C C U A G G C U C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 311 C C C ) ) ) ######################## Repeat 34########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 12 302 G G G A G C C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 310 C C C ) ) ) ######################## Repeat 35########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 13 301 G G A G C C U A A U U A G G C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 309 U C C ) ) ) ######################## Repeat 36########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 124 185 C C G G U A U A A U U A U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 193 C G G ) ) ) ######################## Repeat 37########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 125 184 C G G U A U A A U A U U A U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 192 C C G ) ) ) ######################## Repeat 38########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 154 165 U A U G U A G U C G G C U A C ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 173 A U A ) ) ) ######################## Repeat 39########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 156 163 U G U A G U C U A U A G G C U ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 171 A C A ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 147 155 164 A U G U A G U C U A G G C U A ( ( ( ( ( ( ( ( ( ) ) ) ) ) ) 172 C A U ) ) ) ######################## Repeat 40########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 9 305 A G G G G A G C G C U C C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 312 U ) ######################## Repeat 41########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 10 304 G G G G A G C C G G C U C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 311 C ) ######################## Repeat 42########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 11 303 G G G A G C C U A G G C U C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 310 C ) ######################## Repeat 43########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 12 302 G G A G C C U A U A G G C U C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 309 C ) ######################## Repeat 44########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 101 U G C A C A G A A A C G U A A ( ( ( . . . . . . . . . . . . 120 189 C C G G U A C C G G C U G A A ( ( ( ( ( ) ) ) ) ) . . . . . 204 A C G G C A . . . ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 12 19 274 A A C A G G G G C C C C U A A ( ( ( ( ( ( ( ( ) ) ) ) ) . . A U A C A A A A G C U G G G U . . . . . . . . . . . . . . . 302 U A U U G U U . . . . ) ) ) ######################## Repeat 45########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 123 186 C C G G U A U A U A U A C C G ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 193 G ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 46########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 124 185 C G G U A U A A U U A U A C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 192 G ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 47########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 9 305 A G G G G A G C G C U C C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 312 U ) ######################## Repeat 48########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 10 304 G G G G A G C C G G C U C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 311 C ) ######################## Repeat 49########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 11 303 G G G A G C C U A G G C U C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 310 C ) ######################## Repeat 50########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 12 302 G G A G C C U A U A G G C U C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 309 C ) ######################## Repeat 51########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 123 186 C C G G U A U A U A U A C C G ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 193 G ) ######################## Repeat 52########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 124 185 C G G U A U A A U U A U A C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 192 G ) ######################## Repeat 53########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 U A U A A U A G G A U A U G A ( ( ( ( ( ( ( . . . . . . . . 142 175 A A A U G A G U A U G A G A C . . . . . . . ( ) . . . . . . 189 C U A U U A U A . ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 15 278 G C C U A A C A U A A A U A C ( ( ( ( ( ( ( ( ) . . . . . . A A A A G C U G G G U U A U U . . . . . . . . . . . . . . . 306 G U U A G G C ) ) ) ) ) ) ) ######################## Repeat 54########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 153 166 U A U G U A G U G C U A C A U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 173 A ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 55########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 153 166 U A U G U A G U G C U A C A U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 173 A ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) ######################## Repeat 56########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 154 165 A U G U A G U C G G C U A C A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 172 U ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 57########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 154 165 A U G U A G U C G G C U A C A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 172 U ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) ######################## Repeat 58########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 155 164 U G U A G U C U A G G C U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 171 A ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 59########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 155 164 U G U A G U C U A G G C U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 171 A ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) ######################## Repeat 60########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 9 305 A G G G G A G C G C U C C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 312 U ) ######################## Repeat 61########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 10 304 G G G G A G C C G G C U C C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 311 C ) ######################## Repeat 62########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 11 303 G G G A G C C U A G G C U C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 310 C ) ######################## Repeat 63########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 12 302 G G A G C C U A U A G G C U C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 309 C ) ######################## Repeat 64########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 13 301 G A G C C U A A U U A G G C U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 308 C ) ######################## Repeat 65########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 123 186 C C G G U A U A U A U A C C G ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 193 G ) ######################## Repeat 66########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 124 185 C G G U A U A A U U A U A C C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 192 G ) ######################## Repeat 67########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 125 184 G G U A U A A U A U U A U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 191 C ) ######################## Repeat 68########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 153 166 U A U G U A G U G C U A C A U ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 173 A ) ######################## Repeat 69########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 147 154 165 A U G U A G U C G G C U A C A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 172 U ) ######################## Repeat 70########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 156 163 G U A G U C U A U A G G C U A ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 170 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 148 155 164 U G U A G U C U A G G C U A C ( ( ( ( ( ( ( ( ) ) ) ) ) ) ) 171 A ) ######################## Repeat 71########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 8 306 312 A G G G G A G C U C C C C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 72########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 9 305 311 G G G G A G C G C U C C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 73########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 10 304 310 G G G A G C C G G C U C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 74########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 11 303 309 G G A G C C U A G G C U C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 75########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 12 302 308 G A G C C U A U A G G C U C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 76########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 222 229 249 U A A G G A G G C C U C C U A ( . ( ( ( ( ( ( ) ) ) ) ) ) . 259 A G G A . . . ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 1 7 307 U A G G G G A U C C C C U U A . ( ( ( ( ( ( ) ) ) ) ) ) . . 315 U . ######################## Repeat 77########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 102 G C A C A G A A A C G U A A C ( ( . . . . . . . . . . . . ( 120 189 C G G U A C C G G C U G A A A ( ( ( ( ) ) ) ) ) . . . . . . 203 C G G C . . ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 13 19 274 A C A G G G G C C C C U A A A ( ( ( ( ( ( ( ) ) ) ) ) . . . U A C A A A A G C U G G G U U . . . . . . . . . . . . . . . 301 A U U G U . . . ) ) ######################## Repeat 78########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 122 187 193 C C G G U A U A U A C C G G ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 79########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 123 186 192 C G G U A U A U A U A C C G ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 80########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 124 185 191 G G U A U A A U U A U A C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 81########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 8 306 312 A G G G G A G C U C C C C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 82########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 9 305 311 G G G G A G C G C U C C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 83########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 10 304 310 G G G A G C C G G C U C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 84########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 11 303 309 G G A G C C U A G G C U C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 85########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 12 302 308 G A G C C U A U A G G C U C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 86########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 122 187 193 C C G G U A U A U A C C G G ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 87########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 123 186 192 C G G U A U A U A U A C C G ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 88########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 124 185 191 G G U A U A A U U A U A C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 89########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 A U A A U A G G A U A U G A A ( ( ( ( ( ( . . . . . . . . . 142 175 A A U G A G U A U G A G A C C . . . . . . ( ) . . . . . . . 188 U A U U A U ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 15 278 C C U A A C A U A A A U A C A ( ( ( ( ( ( ( ) . . . . . . . A A A G C U G G G U U A U U G . . . . . . . . . . . . . . ) 305 U U A G G ) ) ) ) ) ######################## Repeat 90########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 152 167 173 U A U G U A G C U A C A U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 91########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 152 167 173 U A U G U A G C U A C A U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 92########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 153 166 172 A U G U A G U G C U A C A U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 93########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 153 166 172 A U G U A G U G C U A C A U ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 94########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 154 165 171 U G U A G U C G G C U A C A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 95########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 154 165 171 U G U A G U C G G C U A C A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 96########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 155 164 170 G U A G U C U A G G C U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 97########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 155 164 170 G U A G U C U A G G C U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 98########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 8 306 312 A G G G G A G C U C C C C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 99########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 9 305 311 G G G G A G C G C U C C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 100########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 10 304 310 G G G A G C C G G C U C C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 101########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 11 303 309 G G A G C C U A G G C U C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 102########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 12 302 308 G A G C C U A U A G G C U C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 103########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 13 301 307 A G C C U A A U U A G G C U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 104########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 122 187 193 C C G G U A U A U A C C G G ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 105########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 123 186 192 C G G U A U A U A U A C C G ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 106########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 124 185 191 G G U A U A A U U A U A C C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 107########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 125 184 190 G U A U A A U A U U A U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 108########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 152 167 173 U A U G U A G C U A C A U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 109########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 147 153 166 172 A U G U A G U G C U A C A U ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 110########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 148 154 165 171 U G U A G U C G G C U A C A ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 111########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 156 163 169 U A G U C U A U A G G C U A ( ( ( ( ( ( ( ) ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 149 155 164 170 G U A G U C U A G G C U A C ( ( ( ( ( ( ( ) ) ) ) ) ) ) ######################## Repeat 112########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 A G U C U A G G U A A C U A G ( ( ( ( ( ( ( . . . . ) ) ) ) 168 G C U ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 233 248 A G G A G G G G A U C C C U C ( ( ( ( ( ( ( . . . ) ) ) ) ) 254 C U ) ) ######################## Repeat 113########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 7 307 312 A G G G G A U C C C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 114########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 8 306 311 G G G G A G C U C C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 115########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 9 305 310 G G G A G C G C U C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 116########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 10 304 309 G G A G C C G G C U C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 117########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 11 303 308 G A G C C U A G G C U C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 118########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 12 302 307 A G C C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 119########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 7 307 312 A G G G G A U C C C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 120########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 8 306 311 G G G G A G C U C C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 121########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 9 305 310 G G G A G C G C U C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 122########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 10 304 309 G G A G C C G G C U C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 123########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 11 303 308 G A G C C U A G G C U C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 124########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 12 302 307 A G C C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 125########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 126########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 65 66 81 84 91 94 209 210 G A A G G G C U C U U C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 221 227 251 G U A A G G A U C C U A A G G ( ( . ( ( ( ( ) ) ) ) . . . . 260 A C ) ) ######################## Repeat 127########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 103 C A C A G A A A C G U A A C C ( . . . . . . . . . . . . ( ( 120 189 G G U A C C G G C U G A A A C ( ( ( ) ) ) ) ) . . . . . . . 202 G G . ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 14 19 274 C A G G G G C C C C U A A A U ( ( ( ( ( ( ) ) ) ) ) . . . . A C A A A A G C U G G G U U A . . . . . . . . . . . . . . . 300 U U G . . ) ######################## Repeat 128########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 121 188 193 C C G G U A U A C C G G ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 129########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 121 188 193 C C G G U A U A C C G G ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 130########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 122 187 192 C G G U A U A U A C C G ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 131########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 122 187 192 C G G U A U A U A C C G ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 132########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 123 186 191 G G U A U A U A U A C C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 133########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 123 186 191 G G U A U A U A U A C C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 134########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 124 185 190 G U A U A A U U A U A C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 135########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 124 185 190 G U A U A A U U A U A C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 136########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 7 307 312 A G G G G A U C C C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 137########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 8 306 311 G G G G A G C U C C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 138########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 9 305 310 G G G A G C G C U C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 139########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 10 304 309 G G A G C C G G C U C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 140########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 11 303 308 G A G C C U A G G C U C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 141########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 12 302 307 A G C C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 142########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 143########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 121 188 193 C C G G U A U A C C G G ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 144########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 122 187 192 C G G U A U A U A C C G ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 145########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 123 186 191 G G U A U A U A U A C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 146########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 124 185 190 G U A U A A U U A U A C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 147########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 122 U A A U A G G A U A U G A A A ( ( ( ( ( . . . . . . . . . . 142 175 A U G A G U A U G A G A C C U . . . . . ( ) . . . . . . . ) 187 A U U A ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 10 15 278 C U A A C A U A A A U A C A A ( ( ( ( ( ( ) . . . . . . . . A A G C U G G G U U A U U G U . . . . . . . . . . . . . ) ) 304 U A G ) ) ) ######################## Repeat 148########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 151 168 173 U A U G U A U A C A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 149########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 151 168 173 U A U G U A U A C A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 150########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 151 168 173 U A U G U A U A C A U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 151########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 152 167 172 A U G U A G C U A C A U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 152########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 152 167 172 A U G U A G C U A C A U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 153########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 152 167 172 A U G U A G C U A C A U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 154########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 153 166 171 U G U A G U G C U A C A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 155########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 153 166 171 U G U A G U G C U A C A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 156########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 153 166 171 U G U A G U G C U A C A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 157########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 154 165 170 G U A G U C G G C U A C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 158########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 154 165 170 G U A G U C G G C U A C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 159########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 154 165 170 G U A G U C G G C U A C ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 160########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 155 164 169 U A G U C U A G G C U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 161########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 155 164 169 U A G U C U A G G C U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 229 249 254 A G G A G G C C U C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 162########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 155 164 169 U A G U C U A G G C U A ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 163########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 7 307 312 A G G G G A U C C C C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 164########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 8 306 311 G G G G A G C U C C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 165########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 9 305 310 G G G A G C G C U C C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 166########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 10 304 309 G G A G C C G G C U C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 167########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 11 303 308 G A G C C U A G G C U C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 168########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 12 302 307 A G C C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 169########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 13 301 306 G C C U A A U U A G G C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 170########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 121 188 193 C C G G U A U A C C G G ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 171########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 122 187 192 C G G U A U A U A C C G ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 172########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 123 186 191 G G U A U A U A U A C C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 173########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 124 185 190 G U A U A A U U A U A C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 174########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 125 184 189 U A U A A U A U U A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 175########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 151 168 173 U A U G U A U A C A U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 176########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 147 152 167 172 A U G U A G C U A C A U ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 177########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 148 153 166 171 U G U A G U G C U A C A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 178########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 149 154 165 170 G U A G U C G G C U A C ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 179########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 156 163 168 A G U C U A U A G G C U ( ( ( ( ( ( ) ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 150 155 164 169 U A G U C U A G G C U A ( ( ( ( ( ( ) ) ) ) ) ) ######################## Repeat 180########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 G U C U A G G U A A C U A G G ( ( ( ( ( ( . . . . ) ) ) ) ) 167 C ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 233 248 253 G G A G G G G A U C C C U C C ( ( ( ( ( ( . . . ) ) ) ) ) ) ######################## Repeat 181########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 6 308 312 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 182########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 7 307 311 G G G G A U C C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 183########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 8 306 310 G G G A G C U C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 184########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 9 305 309 G G A G C G C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 185########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 10 304 308 G A G C C G G C U C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 186########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 11 303 307 A G C C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 187########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 12 302 306 G C C U A U A G G C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 188########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 6 308 312 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 189########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 7 307 311 G G G G A U C C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 190########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 8 306 310 G G G A G C U C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 191########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 9 305 309 G G A G C G C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 192########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 10 304 308 G A G C C G G C U C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 193########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 11 303 307 A G C C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 194########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 12 302 306 G C C U A U A G G C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 195########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 196########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 228 250 254 A G G A G C U C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 197########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 224 228 250 254 A G G A G C U C C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 198########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 6 308 312 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 199########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 7 307 311 G G G G A U C C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 200########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 8 306 310 G G G A G C U C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 201########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 9 305 309 G G A G C G C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 202########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 10 304 308 G A G C C G G C U C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 203########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 11 303 307 A G C C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 204########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 12 302 306 G C C U A U A G G C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 205########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 206########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 207########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 228 250 254 A G G A G C U C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 208########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 66 81 84 91 94 209 A A G G G C U C U U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 222 227 251 259 U A A G G A U C C U A A G G A ( . ( ( ( ( ) ) ) ) . . . . ) ######################## Repeat 209########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 95 102 203 208 G G C U A C U G C A G U C C ( ( . . . ( ( ( ) ) ) . ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 221 226 252 260 G U A A G G C C U A A G G A C ( ( . ( ( ( ) ) ) . . . . ) ) ######################## Repeat 210########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 120 189 193 C C G G U A C C G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 211########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 120 189 193 C C G G U A C C G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 212########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 116 120 189 193 C C G G U A C C G G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 213########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 121 188 192 C G G U A U A C C G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 214########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 121 188 192 C G G U A U A C C G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 215########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 117 121 188 192 C G G U A U A C C G ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 216########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 122 187 191 G G U A U A U A C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 217########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 122 187 191 G G U A U A U A C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 218########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 118 122 187 191 G G U A U A U A C C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 219########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 123 186 190 G U A U A U A U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 220########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 123 186 190 G U A U A U A U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 221########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 119 123 186 190 G U A U A U A U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 222########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 124 185 189 U A U A A U U A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 223########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 124 185 189 U A U A A U U A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 224########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 120 124 185 189 U A U A A U U A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 225########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 6 308 312 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 226########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 7 307 311 G G G G A U C C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 227########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 8 306 310 G G G A G C U C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 228########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 9 305 309 G G A G C G C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 229########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 10 304 308 G A G C C G G C U C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 230########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 11 303 307 A G C C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 231########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 12 302 306 G C C U A U A G G C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 232########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 233########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 228 250 254 A G G A G C U C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 234########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 235########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 120 189 193 C C G G U A C C G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 236########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 121 188 192 C G G U A U A C C G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 237########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 122 187 191 G G U A U A U A C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 238########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 123 186 190 G U A U A U A U A C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 239########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 124 185 189 U A U A A U U A U A ( ( ( ( ( ) ) ) ) ) ######################## Repeat 240########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 123 A A U A G G A U A U G A A A A ( ( ( ( . . . . . . . . . . . 142 175 U G A G U A U G A G A C C U A . . . . ( ) . . . . . . . ) ) 186 U U ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 11 15 278 U A A C A U A A A U A C A A A ( ( ( ( ( ) . . . . . . . . . A G C U G G G U U A U U G U U . . . . . . . . . . . . ) ) ) 303 A ) ######################## Repeat 241########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 123 A A U A G G A U A U G A A A A ( ( ( ( . . . . . . . . . . . 142 175 U G A G U A U G A G A C C U A . . . . ( ) . . . . . . . ) ) 186 U U ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 100 C U G C A C A G A A A C G U A ( ( ( ( . . . . . . . . . . . 116 193 205 A C G C U G A A A C G G C A G . ( ) . . . . . . . . ) ) ) ) ######################## Repeat 242########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 150 169 173 U A U G U A C A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 243########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 150 169 173 U A U G U A C A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 244########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 150 169 173 U A U G U A C A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 245########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 146 150 169 173 U A U G U A C A U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 246########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 151 168 172 A U G U A U A C A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 247########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 151 168 172 A U G U A U A C A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 248########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 151 168 172 A U G U A U A C A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 249########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 147 151 168 172 A U G U A U A C A U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 250########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 152 167 171 U G U A G C U A C A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 251########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 152 167 171 U G U A G C U A C A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 252########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 152 167 171 U G U A G C U A C A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 253########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 148 152 167 171 U G U A G C U A C A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 254########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 153 166 170 G U A G U G C U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 255########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 153 166 170 G U A G U G C U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 256########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 153 166 170 G U A G U G C U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 257########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 149 153 166 170 G U A G U G C U A C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 258########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 154 165 169 U A G U C G G C U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 259########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 154 165 169 U A G U C G G C U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 260########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 154 165 169 U A G U C G G C U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 261########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 150 154 165 169 U A G U C G G C U A ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 262########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 155 164 168 A G U C U A G G C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 263########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 155 164 168 A G U C U A G G C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 264########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 155 164 168 A G U C U A G G C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 225 229 249 253 G G A G G C C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 265########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 151 155 164 168 A G U C U A G G C U ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 266########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 2 6 308 312 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 267########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 3 7 307 311 G G G G A U C C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 268########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 4 8 306 310 G G G A G C U C C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 269########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 5 9 305 309 G G A G C G C U C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 270########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 6 10 304 308 G A G C C G G C U C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 271########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 7 11 303 307 A G C C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 272########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 8 12 302 306 G C C U A U A G G C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 273########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 9 13 301 305 C C U A A U U A G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 274########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 15 19 274 278 A G G G G C C C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 275########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 224 228 250 254 A G G A G C U C C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 276########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 116 120 189 193 C C G G U A C C G G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 277########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 117 121 188 192 C G G U A U A C C G ( ( ( ( ( ) ) ) ) ) ######################## Repeat 278########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 118 122 187 191 G G U A U A U A C C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 279########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 119 123 186 190 G U A U A U A U A C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 280########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 120 124 185 189 U A U A A U U A U A ( ( ( ( ( ) ) ) ) ) ######################## Repeat 281########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 121 125 184 188 A U A A U A U U A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 282########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 146 150 169 173 U A U G U A C A U A ( ( ( ( ( ) ) ) ) ) ######################## Repeat 283########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 147 151 168 172 A U G U A U A C A U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 284########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 148 152 167 171 U G U A G C U A C A ( ( ( ( ( ) ) ) ) ) ######################## Repeat 285########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 149 153 166 170 G U A G U G C U A C ( ( ( ( ( ) ) ) ) ) ######################## Repeat 286########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 150 154 165 169 U A G U C G G C U A ( ( ( ( ( ) ) ) ) ) ######################## Repeat 287########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 152 156 163 167 G U C U A U A G G C ( ( ( ( ( ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 151 155 164 168 A G U C U A G G C U ( ( ( ( ( ) ) ) ) ) ######################## Repeat 288########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 153 166 U C U A G G U A A C U A G G ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 226 233 248 252 G A G G G G A U C C C U C ( ( ( ( ( . . . ) ) ) ) ) ######################## Repeat 289########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 81 94 A G G G U U A G U G C U C U ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 226 233 248 252 G A G G G G A U C C C U C ( ( ( ( ( . . . ) ) ) ) ) ######################## Repeat 290########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 81 94 A G G G U U A G U G C U C U ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 153 166 U C U A G G U A A C U A G G ( ( ( ( ( . . . . ) ) ) ) ) ######################## Repeat 291########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 67 80 G C A G U U A G A U C U G C ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 226 233 248 252 G A G G G G A U C C C U C ( ( ( ( ( . . . ) ) ) ) ) ######################## Repeat 292########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 67 80 G C A G U U A G A U C U G C ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 153 166 U C U A G G U A A C U A G G ( ( ( ( ( . . . . ) ) ) ) ) ######################## Repeat 293########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 67 80 G C A G U U A G A U C U G C ( ( ( ( ( . . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 81 94 A G G G U U A G U G C U C U ( ( ( ( ( . . . . ) ) ) ) ) ######################## Repeat 294########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 24 36 C G G G A A U A U C C U G ( ( ( ( ( . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 226 233 248 252 G A G G G G A U C C C U C ( ( ( ( ( . . . ) ) ) ) ) ######################## Repeat 295########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 24 36 C G G G A A U A U C C U G ( ( ( ( ( . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 153 166 U C U A G G U A A C U A G G ( ( ( ( ( . . . . ) ) ) ) ) ######################## Repeat 296########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 24 36 C G G G A A U A U C C U G ( ( ( ( ( . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 81 94 A G G G U U A G U G C U C U ( ( ( ( ( . . . . ) ) ) ) ) ######################## Repeat 297########################## #================= Pattern Found in RNA =================# >S.acidocaldarius P RNA 24 36 C G G G A A U A U C C U G ( ( ( ( ( . . . ) ) ) ) ) #============= Repeated Pattern Found in RNA =============# >S.acidocaldarius P RNA 67 80 G C A G U U A G A U C U G C ( ( ( ( ( . . . . ) ) ) ) )