NJIT Bioinformatics Data Mining Software
 
Project Description More Info
Biosequence data analysis
Sdiscover Tool for finding motifs in sequences Homepage
LC-MS data analysis
PeakID Tool for detecting peaks in 2D LC-MS data Homepage
Tree data analysis
TMatch Tool for comparing ordered trees Homepage
UpdownDistance Tool for comparing phylogenetic trees Homepage
RNA tertiary interaction prediction
Junction-Explorer Tool for predicting coaxial helical stacking in RNA junctions Homepage
RNA data analysis
RSmatch Tool for aligning RNA secondary structures Homepage
DiscoverR Tool for finding common patterns in RNA secondary structures Homepage
RKalign Tool for aligning RNA secondary structures with pseudoknots Homepage
CHSalign Tool for aligning RNA secondary structures with coaxial helical stacking Homepage