Time & Place

Tuesdays: 6:00PM - 9:05PM, GITC 2400

Teaching Staff

Instructor: Zhi Wei, Office Hours: Mondays 3:30pm-4:30pm, Tuesdays 3:00pm-5:00pm, or by appointment, GITC 3801, email: zhiweiXnjit.edu, phone: (973) 642-4497
Teaching Assistant: Wei Wang, ww42@njit.edu

Textbooks

• Bioinformatics for High Throughput Sequencing, Springer Press, ISBN: 9781461407812, by Naiara Rodríguez-Ezpeleta, Michael Hackenberg and Ana M. Aransay (Oct 25, 2011)

Announcements:

Jan 20: the first class is scheduled on Jan 21, please find course slides, lab exercise and homework from Moodle.

Course Information: Description, Prerequisites, Requirements, Collaboration

General

• SAMtools

RNA-Seq

• Cufflinks
• Bowtie
• Bowtie2
• Tophat