List of peer-reviewed studies that used simulation data produced by the CalC software.        

  1. Kobbersmed JRL, Grasskamp AT, Jusyte M, Böhme MA, Ditlevsen1 S, Sørensen JB, Walter AM (2020)
    Rapid regulation of vesicle priming explains synaptic facilitation despite heterogeneous vesicle:Ca2+ channel distances. eLife 9: e51032.   Full Text  
  2. Ritzau-Jost A, Jablonski L, Viotti J, Lipstein N, Eilers J, Hallermann S (2018)
    Apparent calcium dependence of vesicle recruitment. J Physiol 596.19: 4693-4707.   DOI     Full Text     Scripts  
  3. Tran V, Stricker C (2018)
    Diffusion of Ca2+ from small boutons en passant into the axon shapes AP-evoked Ca2+ transients.
    Biophysical Journal 115: 1344-1356   DOI     Full Text  
  4. Tran V, Parka MCH, Stricker C (2018)
    An improved measurement of the Ca2+-binding affinity of fluorescent Ca2+ indicators.
    Cell Calcium 71: 86-94.   Full Text  
  5. Böhme MA, Grasskamp AT, Walter AM (2018) Regulation of synaptic release-site Ca2+ channel coupling as a mechanism to control release probability and short-term plasticity FEBS Letters 592(21): 3516-3531   Full Text     DOI  
  6. Walter AM, Böhme MA, Sigrist SJ (2018)
    Vesicle release site organization at synaptic active zones. Neurosci Res 127: 3-13   Full Text     DOI  
  7. V. Matveev (2018)
    Extension of Rapid Buffering Approximation to Ca2+ Buffers with Two Binding Sites
    Biophys J, 114(5): 1204-1215   Full Text     PDF  
  8. Neef J, Urban NT, Ohn T-L, Frank T, Jean P, Hell SW, Willig KI, Moser T (2018)
    Quantitative optical nanophysiology of Ca2+ signaling at inner hair cell active zones.
    Nature Communications 9: 290   Full Text     Scripts  
  9. Gandasi NR, Yin P, Riz M, Chibalina MV, Cortese G, Lund PE, Matveev V, Rorsman P, Sherman A, Pedersen MG, Barg (2017)
    Ca2+ channel clustering with insulin-containing granules is disturbed in type 2 diabetes.
    J Clin Investigation 127(6): 2353-2364   Full Text  
  10. Tagliavini A, Tabak J, Bertram R, Pedersen MG (2016)
    Is bursting more effective than spiking in evoking pituitary hormone secretion? A spatiotemporal simulation study of calcium and granule dynamics.
    Am J Physiol Endocrinol Metab 310(7):E515-25   Full Text  
  11. Böhme MA, Beis C, Reddy-Alla S, Reynolds E, Mampell MM, Grasskamp AT, Lützkendorf J, Bergeron DD, Driller JH,
    Babikir H, Göttfert F, Robinson IM, O'Kane CJ, Hell SW, Wahl MC, Stelzl U, Loll B, Walter AM, Sigrist SJ (2016)
    Active zone scaffolds differentially accumulate Unc13 isoforms to tune Ca2+ channel-vesicle coupling.
    Nature Neurosci 19: 1311-1320.   Full Text  
  12. V. Matveev (2016)
    Padé Approximation of a Stationary Single-Channel Ca2+ Nanodomain.
    Biophys J 111(9): 2062-2074.   Full Text     PDF  
  13. Stanley EF (2015) Single calcium channel domain gating of synaptic vesicle fusion at fast synapses; analysis by graphic modeling. Channels 9(5): 324-333   Full Text  
  14. Delvendahl I, Jablonski L, Baade C, Matveev V, Neher E, Hallermann S (2015)
    Reduced endogenous Ca2+ buffering speeds active zone Ca2+ signaling.
    PNAS USA doi: 10.1073/pnas.1508419112   Full Text  
  15. Matthews EQ, Dietrich D (2015)
    Buffer mobility and the regulation of neuronal calcium domains.
    Frontiers Cellular Neurosci 9: 48.   Full Text  
  16. Prokopiou AN, Drakakis EM (2015)
    Quantitative Analysis Linking Inner Hair Cell Voltage Changes and Postsynaptic Conductance Change: A Modelling Study. BioMed Research International 2015: 626971.   Full Text  
  17. Cox DH (2014)
    Modeling a Ca2+ Channel/BKCa Channel Complex at the Single-Complex Level.
    Biophys J 107: 2797-2814.   Full Text  
  18. Mehta B, Ke JB, Zhang L, Baden AD, Markowitz AL, Nayak S, Briggman KL, Zenisek D, Singer JH (2014)
    Global Ca2+ Signaling Drives Ribbon-Independent Synaptic Transmission at Rod Bipolar Cell Synapses.
    J Neurosci 34: 6233-6244.   Full Text  
  19. Earley S (2013)
    TRPM4 cannels in smooth muscle function.
    Pflügers Archiv 465: 1223-1231.   Full Text  
  20. Janicek R, Zahradníková A Jr; Poláková E, Pavelková J, Zahradník I, Zahradníková A (2012)
    Calcium spike variability in cardiac myocytes results from activation of small cohorts of RyR2 channels.
    Journal of Physiology 590.20: 5091-5106.   Full Text  
  21. Gonzales AL, Earley S (2012)
    Endogenous cytosolic Ca2+ buffering is necessary for TRPM4 activity in cerebral artery smooth muscle cells.
    Cell Calcium 51: 82-93.   Full Text  
  22. Matveev V, Bertram R, Sherman A (2011)
    Calcium Cooperativity of Exocytosis as a Measure of Calcium Channel Domain Overlap.
    Brain Research 1398: 126-138.   PDF     Full Text     Scripts  
  23. Weber AM, Wong FK, Tufford AR, Schlichter LC, Matveev V, Stanley EF (2010)
    N-type Ca2+ channels carry the largest current: implications for nanodomains and transmitter release.
    Nature Neuroscience 13: 1348-1350.   Full Text     Scripts  
  24. Pan B, Zucker RS (2009)
    A general model of synaptic transmission and short-term plasticity.
    Neuron 62(4): 539-554.   Full Text  
  25. Matveev V, Bertram R, Sherman A (2009)
    Ca2+ current vs. Ca2+ channel cooperativity of exocytosis.
    Journal of Neuroscience 29(39):12196-12209.   PDF     Full Text     Scripts  
  26. Frank T, Khimich D, Neef A, Moser T (2009)
    Mechanisms contributing to synaptic Ca2+ signals and their heterogeneity in hair cells
    PNAS USA 106(11): 4483-4488.   Full Text  
  27. Fakler B, Adelman JP (2008)
    Control of KCa Channels by Calcium Nano/Microdomains. Neuron 59: 873-881.   Full Text  
  28. Allana TN, Lin JW (2008)
    Effects of increasing Ca2+ channel-vesicle separation on facilitation at the crayfish inhibitory neuromuscular junction Neuroscience 154: 1242-1254.   Full Text  
  29. Gilmanov IR, Samigullin DV, Vyskocil F, Nikolsky EE, Bukharaeva EA (2008)
    Modeling of quantal neurotransmitter release kinetics in the presence of fixed and mobile calcium buffers
    Journal of Computational Neuroscience 25: 296-307.   Full Text  
  30. Zahradníková A Jr; Poláková E, Zahradník I, Zahradníková A (2007)
    Kinetics of calcium spikes in rat cardiac myoytes J Physiology 578: 677-691.   Full Text  
  31. Cornelisse LN, van Elburg RAJ, Meredith RM, Yuste R, Mansvelder HD (2007)
    High Speed Two-Photon Imaging of Calcium Dynamics in Dendritic Spines: Consequences for Spine Calcium Kinetics and Buffer Capacity. PLoS ONE 2(10): e1073.   Full Text     Scripts  
  32. Müller A, Kukley M, Uebachs M, Beck H, Dietrich D (2007)
    Nanodomains of Single Ca2+ Channels Contribute to Action Potential Repolarization in Cortical Neurons.
    Journal of Neuroscience, 27(3):483-495.   Full Text  
  33. Babich O, Matveev V, Harris AL, Shirokov R (2007)
    Ca2+-dependent inactivation of CaV1.2 channels prevents Gd2+ block: does Ca2+ block the pore of inactivated channels?
    Journal of General Physiology, 129: 477-483.   Full Text     Scripts  
  34. Berkefeld H, Sailer, Bildl, Rohde, Thumfart, Eble, Klugbauer, Reisinger, Bischofberger, Oliver, Knaus, Schulte, Fakler B (2006)
    BKCa-Cav Channel Complexes Mediate Rapid and Localized Ca2+-Activated K+ Signaling.
    Science 314: 615-620.   Full Text  
  35. Matveev V, Bertram R, Sherman A (2006)
    Residual Bound Ca2+ Can Account for the Effects of Ca2+ Buffers on Synaptic Facilitation
    Journal of Neurophysiology, 96: 3389-3397.   Full Text     PDF     Scripts  
  36. Millar AG, Zucker RS, Ellis-Davies GCR, Milton P, Charlton P, Atwood HL (2005)
    Calcium Sensitivity of Neurotransmitter Release Differs at Phasic and Tonic Synapses.
    Journal of Neuroscience, 25(12):3113-3125.   Full Text  
  37. Müller A, Kukley M, Stausberg P, Beck H, Muller W, Dietrich D (2005)
    Endogenous Ca2+ buffer concentration and Ca2+ microdomains in hippocampal neurons.
    Journal of Neuroscience, 25(3):558-565.   Full Text  
  38. Lin JW, Fu Q, Allana T (2005)
    Probing the endogenous Ca2+ buffers at the presynaptic terminals of the crayfish neuromuscular junction.
    Journal of Neurophysiology, 94: 377-386.   Full Text  
  39. Matveev V, Zucker RS, Sherman A (2004)
    Facilitation through Buffer Saturation: Constraints on Endogenous Buffering Properties
    Biophysical Journal, 86:2691-2709.   Full Text     PDF     Scripts  
  40. Bennett MR, Farnell L, Gibson WG (2004)
    The Facilitated Probability of Quantal Secretion within an Array of Calcium Channels of an Active Zone at the Amphibian Neuromuscular Junction. Biophysical Journal 86(5): 2674-2690.   Full Text  
  41. Matveev V, Sherman A, Zucker RS (2002)
    New and Corrected Simulations of Synaptic Facilitation
    Biophysical Journal 83:1368-1373.   Full Text     PDF     Scripts  

Victor Matveev