RNA Lab
The place for RNA tools
Phylogenetic Tree Drawing and Plotting Tools
RNA 2D Structure Drawing and Plotting Tools
- jViz.Rna
- KineFold (for pseudoknots)
- loopDloop
- NUPACK
- PseudoViewer
- RNAmovies
- RNAplot
- RNAstructure
- RNAView/RnamlView
- RnaViz
- Scarna
- Squiggles
- StructureLab
- VARNA
- Wikiomics Toolbox
- XRNA
RNA 3D Structure Drawing and Plotting Tools
- 3DNA
- Chimera UCSF
- FR3D
- Jmol
- MC-Annotate
- MMTSB Tool Set
- MolScript
- PyMOL
- RasMol
- Raster3D
- RNAView/RnamlView
- RZparser Berkeley
- S2S
- SeqLogo Berkeley
- Swiss-PdbViewer
- VMD
RNA Alignment Visualization Tools
RNA Evaluation, Classification and Prediction
Meta Tools
- Denmark SARSE Toolkit
- Freiburg RNA Tools
- Japan Rtips Tools
- National Chiao Tung University Toolbox
- ncRNA.org Software
- ncRNA.org Toolbox
- Simon Fraser University RNA Suite
- University of British Columbia Meta Toolbox
- University of British Columbia RNAsoft
- Vienna RNA Websuite
Internet Resources
- Biowiki RNA Structure Resources
- Canada RNA Bioinformatics Resource
- ncRNA.org
- RNA-As-Graphs web resource
- RNA Studio
- The RNA Society
- UTResource
- Viral Bioinformatics Resource Center
Tutorials
Data Mining Tools
- FSAS (Free Statistical Analysis Software)
- FSS (Free Statistical Software)
- NPatternRecognizer
- PCP (Pattern Classification Program)
- Waffles
- Weka
Data Mining Slides
Bioinformatics Slides
